Formation of polarized contractile interfaces by self-organized Toll-8/Cirl GPCR asymmetry

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Cross-reactivity of SARS-CoV structural protein antibodies against SARS-CoV-2

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Integrating structure-based machine learning and co-evolution to investigate specificity in plant sesquiterpene synthases

Sesquiterpene synthases (STSs) catalyze the formation of a large class of plant volatiles called sesquiterpenes. While thousands of putative STS sequences from diverse plant species are available, only a small number of them have been functionally characterized. Sequence identity-based screening for desired enzymes, often used in biotechnological applications, is difficult to apply here as STS sequence similarity is strongly affected by species. This calls for more sophisticated computational methods for functionality prediction. We investigate the specificity of precursor cation formation in these elusive enzymes. By inspecting multi-product STSs, we demonstrate that STSs have a strong selectivity towards one precursor cation. We use a machine learning approach combining sequence and structure information to accurately predict precursor cation specificity for STSs across all plant species. We combine this with a co-evolutionary analysis on the wealth of uncharacterized putative STS sequences, to pinpoint residues and distant functional contacts influencing cation formation and reaction pathway selection. These structural factors can be used to predict and engineer enzymes with specific functions, as we demonstrate by predicting and characterizing two novel STSs from Citrus bergamia.     

Serial immune function testing to predict clinical disease relapse in patients with solid tumors

Cancer Immunology, Immunotherapy -     

Gustatory adaptation affects sexual maturation in male German cockroaches,Blattella germanica

Adaptations to hazardous environmental factors are essential for survival, although they may be maladaptive in conditions where the hazard is absent. In German cockroach (Blattella germanica L.) populations, glucose aversion has evolved rapidly in response to glucose‐containing insecticidal baits, but little is known about the consequences of this behaviour in the absence of bait. In the present study, glucose‐averse (GA) and wild‐type (WT) male German cockroaches are restricted to a range of nutritionally defined diets containing either glucose or fructose as the sole carbohydrate source, and time to first expression of courtship is measured by stimulating the male antennae daily with isolated antennae from receptive, 6‐day‐old females. Glucose‐averse males that are restricted to glucose‐containing diets mature their courtship responses significantly later than GA males restricted to fructose‐containing diets, whereas there is no difference in maturation of courtship responses between GA males restricted to fructose‐containing diets and WT males restricted to diets containing either sugar type. Glucose‐averse males furthermore respond later to GA female antennae than to WT female antennae, all from 6‐day‐old females. This suggests that GA females are less sexually stimulating, and the results are also consistent with earlier findings showing that GA females contain less developed oocytes than WT females at this age. These findings demonstrate that an adaptive gustatory mutation conferring protection from a toxin may have comparatively detrimental effects under conditions where the toxin has vanished, both by delaying female sexual maturation and signalling and by delaying male sexual maturation and courtship under conditions where glucose is a major energy source.